Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016276.1 Corchorus capsularis cultivar CVL-1 contig16297, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13268

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1777--1861
33
2.6
33
84
0
107
24
38
28
8
1.84
1799--1883
33
2.6
32
83
10
100
22
43
27
7
1.79
2537--2572
8
4.4
8
96
3
63
13
11
25
50
1.75
2537--2577
16
2.5
17
88
8
66
19
9
24
46
1.80
4102--4126
10
2.5
10
100
0
50
48
20
8
24
1.76
10042--10106
33
2.0
33
93
0
112
23
38
30
7
1.83
10035--10137
33
3.1
33
83
5
102
23
37
29
9
1.87
12612--12707
33
2.9
33
84
0
120
27
10
17
44
1.81
12735--12838
33
3.2
33
83
4
124
31
9
17
41
1.82

Tables:   1

The End!