Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016282.1 Corchorus capsularis cultivar CVL-1 contig16303, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9479

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1138--1169
5
6.6
5
92
7
57
81
0
18
0
0.70
1134--1169
14
2.6
14
87
12
56
80
0
19
0
0.71
3104--3184
29
2.7
29
84
3
99
23
23
14
38
1.92
3875--3932
29
2.0
29
93
0
98
43
12
18
25
1.85
3983--4074
46
2.0
46
100
0
184
28
23
30
17
1.97
4195--4314
59
2.0
59
100
0
240
20
20
23
36
1.95
4388--4439
23
2.3
23
100
0
104
46
7
13
32
1.72

Tables:   1

The End!