Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016307.1 Corchorus capsularis cultivar CVL-1 contig16328, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22346

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
327--790
229
2.0
229
94
0
813
36
14
12
36
1.84
556--1636
338
3.2
335
87
5
1413
37
15
14
32
1.88
2936--2972
15
2.4
16
86
4
58
54
2
0
43
1.14
3051--3085
11
3.3
11
84
8
54
37
14
0
48
1.44
3050--3093
21
2.2
20
91
4
70
38
15
0
45
1.47
5108--5198
45
2.0
45
89
0
137
10
20
23
45
1.83
9013--9047
12
2.9
12
86
0
52
28
40
2
28
1.71
9049--9103
27
2.0
27
100
0
110
29
25
7
38
1.83
9816--9856
21
2.0
21
85
0
55
31
0
46
21
1.52
16209--16239
11
2.8
11
95
0
53
80
0
19
0
0.71
17170--17216
24
2.0
24
100
0
94
27
17
34
21
1.95
17353--17597
51
5.0
50
83
10
319
17
22
26
33
1.96

Tables:   1

The End!