Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016309.1 Corchorus capsularis cultivar CVL-1 contig16330, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30549

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
493--585
9
10.3
9
67
21
52
51
2
2
44
1.25
523--583
11
5.7
11
73
7
63
55
0
1
42
1.09
523--588
22
3.1
21
78
8
71
56
0
1
42
1.08
8294--8323
15
2.0
15
100
0
60
40
6
20
33
1.78
12228--12266
19
2.1
19
100
0
78
20
25
28
25
1.99

Tables:   1

The End!