Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016311.1 Corchorus capsularis cultivar CVL-1 contig16332, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4250

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
655--1631
427
2.3
427
91
0
1598
27
21
22
28
1.99
1175--1901
269
2.7
270
83
3
835
27
21
21
29
1.99
2016--2386
159
2.3
157
78
4
379
29
22
20
26
1.99
1856--3040
569
2.1
568
85
3
1564
28
21
21
28
1.99
2342--2613
141
1.9
141
89
0
418
28
22
21
27
1.99
2563--2987
158
2.7
153
77
9
410
28
21
21
29
1.98
2880--3093
111
1.9
111
83
0
275
28
21
21
29
1.98
2895--3500
300
2.0
300
91
0
991
28
21
21
28
1.99
3453--4250
270
2.9
269
86
3
1034
28
21
21
27
1.99
3881--4089
111
1.9
111
82
2
267
29
22
22
26
1.99

Tables:   1

The End!