Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016312.1 Corchorus capsularis cultivar CVL-1 contig16333, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24932

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
219--731
270
1.9
268
80
4
586
27
22
21
29
1.99
1--1105
431
2.6
426
85
3
1450
27
21
21
29
1.99
791--991
111
1.8
111
82
2
260
30
23
22
22
1.99
1294--2010
374
1.9
375
89
0
1103
26
20
22
29
1.99
1971--2367
159
2.5
160
79
4
406
29
22
20
27
1.98
1995--2367
163
2.3
159
79
5
392
30
23
19
27
1.98
1628--2611
433
2.3
427
82
4
1190
28
21
21
28
1.99
2290--2510
111
2.0
111
82
1
273
28
23
22
25
1.99
6852--6920
26
2.6
25
79
4
75
44
18
17
18
1.86
7178--7214
9
4.1
9
93
6
58
43
10
32
13
1.79
12835--12917
33
2.5
32
86
7
112
44
22
8
24
1.80
15927--15983
30
1.9
30
89
7
89
22
28
17
31
1.97
20424--20459
19
1.9
18
88
5
54
33
22
2
41
1.68
22474--22498
12
2.1
12
100
0
50
44
24
16
16
1.86

Tables:   1

The End!