Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016315.1 Corchorus capsularis cultivar CVL-1 contig16336, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6078

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
452--478
6
4.5
6
100
0
54
55
14
0
29
1.40
1417--1442
10
2.6
10
100
0
52
23
7
19
50
1.73
2106--2194
33
2.7
33
83
0
106
26
12
19
41
1.87
2228--2306
32
2.4
32
87
2
113
26
10
18
44
1.82
2228--2320
33
2.9
32
80
9
93
31
9
18
40
1.83
2217--2331
32
3.6
32
76
12
103
32
8
18
40
1.81
4128--4191
12
5.5
13
68
24
52
21
39
25
14
1.91

Tables:   1

The End!