Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016325.1 Corchorus capsularis cultivar CVL-1 contig16346, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2979

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
661--753
38
2.4
39
89
3
143
35
20
18
25
1.95
790--1083
77
3.9
76
75
8
251
31
19
18
30
1.96
765--1080
39
8.3
39
76
11
278
31
18
17
31
1.95
765--1051
114
2.5
113
94
1
493
31
18
17
32
1.94
1116--1206
15
5.5
15
69
19
65
35
21
4
38
1.74
1115--1210
34
2.8
34
91
0
147
36
21
5
36
1.76
1220--1367
47
3.1
47
90
1
217
20
26
18
33
1.96
1498--1659
33
5.3
33
67
22
109
29
28
9
32
1.89
1531--1626
27
3.3
27
71
20
95
30
28
8
33
1.86
1467--1666
60
3.3
60
93
0
328
29
27
10
33
1.90

Tables:   1

The End!