Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016327.1 Corchorus capsularis cultivar CVL-1 contig16348, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12686

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
145--190
24
1.9
24
90
0
74
23
21
23
30
1.99
146--198
24
2.2
24
83
6
63
26
18
24
30
1.98
2953--3049
33
2.9
33
86
3
106
9
29
38
22
1.85
10973--11005
17
1.9
17
93
0
57
57
24
6
12
1.57
12451--12494
21
2.1
21
83
8
54
22
25
11
40
1.87
12540--12615
33
2.3
33
88
4
118
19
42
27
10
1.84

Tables:   1

The End!