Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016334.1 Corchorus capsularis cultivar CVL-1 contig16355, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45559

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14995--15036
21
2.0
20
86
4
57
40
11
21
26
1.88
19043--20963
981
1.9
985
94
2
3404
34
21
15
28
1.94
23372--23413
21
2.0
20
86
4
57
40
11
21
26
1.88
23832--23873
21
2.0
20
86
4
57
40
11
21
26
1.88
23347--24269
460
2.0
460
99
0
1819
28
16
18
36
1.93
34763--34808
21
2.2
21
88
0
65
15
28
28
28
1.96
38348--38547
99
2.0
99
100
0
400
32
31
13
23
1.92
41995--42019
12
2.1
12
100
0
50
24
20
0
56
1.43

Tables:   1

The End!