Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016348.1 Corchorus capsularis cultivar CVL-1 contig16369, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48032

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
914--943
15
2.0
15
93
0
51
90
10
0
0
0.47
1875--1909
2
17.5
2
100
0
70
51
0
0
48
1.00
10238--10271
2
17.5
2
93
6
61
50
0
0
50
1.00
16262--16293
15
2.1
15
100
0
64
34
12
0
53
1.39
21574--21611
20
1.9
20
88
0
58
44
10
18
26
1.82
23334--23375
3
14.0
3
100
0
84
33
0
0
66
0.92
38048--38074
2
13.5
2
100
0
54
51
0
0
48
1.00
38136--38287
62
2.5
62
88
0
214
35
13
8
42
1.74
38257--38904
22
30.1
22
68
15
220
35
16
9
39
1.80
38315--38360
24
2.0
24
91
4
76
26
10
6
56
1.58
38301--38361
23
2.7
23
80
12
72
29
8
9
52
1.63
38941--38988
22
2.2
22
77
3
53
39
20
8
31
1.82
39136--39212
38
2.1
38
87
7
113
62
7
16
12
1.53

Tables:   1

The End!