Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016355.1 Corchorus capsularis cultivar CVL-1 contig16376, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25339

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15864--15979
33
3.6
33
82
3
139
39
17
9
33
1.82
16003--16051
24
2.0
24
88
0
71
36
22
8
32
1.84
23536--23569
8
4.1
8
85
7
50
58
14
2
23
1.50
23643--23677
19
1.9
17
88
11
52
82
2
0
14
0.77
25145--25249
33
3.2
33
83
2
140
25
9
19
45
1.80
25267--25331
33
2.0
33
90
0
103
33
9
15
41
1.79

Tables:   1

The End!