Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016370.1 Corchorus capsularis cultivar CVL-1 contig16391, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29646

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3417--3447
6
5.0
6
92
7
53
51
16
0
32
1.44
3444--3478
13
2.7
13
100
0
70
62
8
8
20
1.49
11988--12078
13
7.2
12
68
16
51
8
41
37
12
1.73
12014--12062
25
2.0
25
100
0
98
6
44
36
12
1.67
16804--16860
30
1.9
30
92
7
98
15
17
36
29
1.91
18115--18184
28
2.5
28
88
0
104
35
7
5
51
1.53
19860--19936
40
1.9
41
94
2
138
48
15
1
35
1.54
20304--20449
33
4.5
33
86
4
172
10
39
36
13
1.79
22169--22209
4
10.2
4
100
0
82
51
0
24
24
1.49
22926--22998
30
2.4
31
82
11
89
41
23
23
12
1.88
22948--23005
30
1.9
30
100
0
116
36
20
25
17
1.94
27396--27421
10
2.6
10
100
0
52
38
23
7
30
1.83
28010--28063
24
2.5
22
80
16
67
31
27
11
29
1.91
28021--28062
12
3.5
12
96
0
75
30
23
11
33
1.91
28550--28613
32
2.0
32
81
6
76
25
21
12
40
1.88

Tables:   1

The End!