Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016375.1 Corchorus capsularis cultivar CVL-1 contig16396, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31233

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
270--326
24
2.4
24
91
5
89
22
10
29
36
1.88
2319--2349
16
1.9
16
100
0
62
19
19
32
29
1.96
7862--7924
30
2.1
30
91
5
101
28
19
33
19
1.96
10393--10421
10
2.7
11
89
10
51
75
17
6
0
1.01
12936--12967
16
2.0
16
100
0
64
18
37
12
31
1.88
13754--13787
16
2.2
16
89
5
52
29
2
8
58
1.43
21222--21284
29
2.2
29
100
0
126
28
3
6
61
1.36
22326--22361
19
1.9
18
88
5
54
41
2
22
33
1.68
23643--23676
16
2.2
16
89
5
52
29
2
8
58
1.43
25715--25863
60
2.5
60
87
0
217
33
8
19
38
1.83

Tables:   1

The End!