Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016376.1 Corchorus capsularis cultivar CVL-1 contig16397, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9636

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2878--2909
13
2.5
13
94
0
55
28
6
50
15
1.68
3458--3547
16
5.6
16
75
5
83
11
16
35
36
1.84
3465--3552
32
2.8
32
85
0
122
9
18
38
34
1.82
8837--8862
10
2.6
10
100
0
52
23
7
19
50
1.73
9443--9481
20
2.0
20
89
0
60
69
10
5
15
1.34
9451--9492
20
2.0
20
90
9
66
66
4
4
23
1.30
9450--9498
10
4.5
11
78
17
57
63
8
6
22
1.44

Tables:   1

The End!