Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016381.1 Corchorus capsularis cultivar CVL-1 contig16402, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50488

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3187--3241
23
2.4
23
93
0
92
25
27
29
18
1.98
4367--4476
58
1.9
58
87
5
161
38
13
14
33
1.86
9245--9446
102
2.0
102
97
0
377
23
22
18
34
1.96
23369--23419
21
2.4
21
90
0
75
25
25
17
31
1.97
24666--24757
31
3.1
29
81
4
105
17
23
25
33
1.96
32660--32700
21
2.0
21
95
0
73
19
14
31
34
1.92
32850--32882
17
1.9
17
93
0
57
27
9
36
27
1.87
33234--33746
156
3.3
156
92
3
806
35
18
15
29
1.92
46068--46881
200
4.1
200
84
3
1049
34
18
13
33
1.90
48867--49410
203
2.7
198
86
5
725
33
19
14
32
1.92
49430--49459
2
15.5
2
93
6
53
50
0
0
50
1.00

Tables:   1

The End!