Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016407.1 Corchorus capsularis cultivar CVL-1 contig16428, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25506

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3690--3717
10
2.8
10
100
0
56
28
10
28
32
1.90
11019--11172
52
3.0
51
80
11
163
42
14
10
32
1.79
11090--11190
49
2.1
49
94
0
175
46
13
7
31
1.72
11874--11999
51
2.5
51
100
0
252
30
11
26
30
1.92
13552--13580
1
29.0
1
100
0
58
100
0
0
0
0.00
15166--15212
18
2.6
18
96
0
85
25
42
12
19
1.86
15367--15833
234
2.0
233
97
0
889
50
2
11
34
1.54
19186--19259
2
39.0
2
81
10
93
44
0
4
51
1.20
19186--19259
25
3.3
23
80
17
84
44
0
4
51
1.20
19401--19828
214
2.0
210
89
2
660
33
15
14
36
1.88
19415--19952
214
2.5
209
82
7
590
33
15
14
35
1.89
20639--20684
23
2.0
23
95
0
83
50
17
15
17
1.79
23987--24011
11
2.3
11
100
0
50
40
0
24
36
1.55
24238--24299
31
2.0
31
96
0
115
40
6
17
35
1.76

Tables:   1

The End!