Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016410.1 Corchorus capsularis cultivar CVL-1 contig16431, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13375

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6519--6584
31
2.1
31
86
5
89
28
19
3
48
1.64
6685--6761
38
2.1
35
88
7
109
12
16
12
57
1.66
6893--6935
19
2.1
21
84
16
56
30
6
0
62
1.21
7107--7193
44
2.0
43
82
6
104
35
9
19
35
1.84
7105--7190
22
3.9
22
76
4
93
34
9
18
37
1.83
7105--7245
22
6.3
22
71
9
70
31
9
20
38
1.84
7365--7669
22
13.7
22
68
16
76
40
10
13
34
1.79
7440--7669
22
10.5
22
72
9
96
41
10
13
33
1.80
7501--7691
44
4.4
44
74
5
147
41
9
13
35
1.76
7503--7669
66
2.5
66
77
8
171
40
9
13
35
1.78
7775--7825
19
2.6
20
90
6
86
45
11
17
25
1.83
7880--8085
22
9.5
22
73
9
102
42
9
15
33
1.78
7960--8264
22
13.7
23
72
7
132
35
10
15
38
1.82
7959--8065
45
2.4
44
80
10
126
39
9
14
36
1.79
8105--8212
45
2.4
45
79
8
105
32
11
17
38
1.85

Tables:   1

The End!