Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016411.1 Corchorus capsularis cultivar CVL-1 contig16432, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12146

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1290--1329
19
2.1
19
100
0
80
10
50
20
20
1.76
1683--1723
17
2.4
17
80
15
57
7
19
12
60
1.54
5321--5377
14
4.0
14
79
2
69
12
8
24
54
1.65
5414--5469
21
2.7
21
78
10
53
12
8
23
55
1.65
6730--6887
31
5.4
31
74
13
127
18
22
25
33
1.97
6778--6881
53
2.0
53
88
0
154
18
20
25
35
1.95
10689--10746
22
2.8
20
82
10
80
32
17
17
32
1.93
10685--10746
20
3.0
20
81
9
88
30
17
16
35
1.92
10421--11080
356
1.9
356
94
0
1178
30
22
11
35
1.90

Tables:   1

The End!