Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016414.1 Corchorus capsularis cultivar CVL-1 contig16435, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17968

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
495--609
56
2.0
57
89
6
178
48
16
24
10
1.77
9972--10028
21
2.8
21
83
2
62
8
29
33
28
1.87
16048--16150
54
1.9
54
91
0
170
33
14
23
29
1.94
16238--16364
33
3.8
33
90
0
200
28
21
18
31
1.97
16396--16469
32
2.2
33
85
4
96
47
4
28
20
1.68
16665--16716
17
3.1
17
88
5
70
55
3
28
11
1.53
16655--16716
17
3.5
19
75
20
62
54
3
29
12
1.53
17003--17029
6
4.5
6
100
0
54
55
14
0
29
1.40

Tables:   1

The End!