Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016416.1 Corchorus capsularis cultivar CVL-1 contig16437, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33523

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2346--2429
39
2.2
39
86
4
116
51
7
11
29
1.65
3672--3697
10
2.6
10
100
0
52
23
7
19
50
1.73
5669--5707
17
2.3
17
90
0
60
10
41
0
48
1.37
6667--6782
61
1.9
61
84
7
155
38
8
22
30
1.84
6667--6792
60
2.1
60
80
5
148
37
8
25
28
1.86
10181--10305
35
3.6
35
84
3
164
43
20
19
16
1.88
12988--13029
14
2.8
15
82
10
59
38
33
7
21
1.81
21178--21223
18
2.6
18
82
0
56
28
8
13
50
1.70
25068--25103
2
18.0
2
100
0
72
50
0
0
50
1.00
30987--31023
2
18.5
2
100
0
74
0
51
0
48
1.00

Tables:   1

The End!