Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001642.1 Corchorus capsularis cultivar CVL-1 contig01642, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4059

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
746--778
17
1.9
17
93
0
57
45
0
6
48
1.27
1527--1560
17
2.0
17
100
0
68
17
5
11
64
1.45
1529--1566
17
2.2
17
90
0
58
21
5
10
63
1.46
2071--2128
30
2.0
30
93
3
100
22
24
15
37
1.93
2191--2250
28
2.1
29
87
3
86
46
13
20
20
1.83

Tables:   1

The End!