Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016425.1 Corchorus capsularis cultivar CVL-1 contig16446, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33541

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
885--914
2
15.0
2
100
0
60
50
0
0
50
1.00
1895--1924
2
15.0
2
100
0
60
50
0
0
50
1.00
7699--7739
18
2.2
19
83
12
50
14
17
34
34
1.90
20932--20973
6
7.0
6
88
0
66
0
61
16
21
1.34
21293--21325
14
2.3
15
89
5
50
42
0
6
51
1.26
21418--21445
2
14.0
2
100
0
56
50
0
0
50
1.00
23495--23519
13
1.9
13
100
0
50
32
8
20
40
1.81
24533--24628
46
2.1
46
98
0
183
31
18
10
39
1.85
24543--24639
46
2.1
46
90
3
151
34
15
12
38
1.85
24736--24765
15
2.0
15
93
0
51
30
26
13
30
1.94

Tables:   1

The End!