Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016436.1 Corchorus capsularis cultivar CVL-1 contig16457, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25052

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1298--1394
33
2.9
33
87
0
131
26
9
21
42
1.83
1419--1494
33
2.3
33
100
0
152
23
11
19
44
1.84
3278--3379
18
5.8
18
69
17
61
48
0
3
47
1.27
7577--7620
19
2.6
16
77
19
52
25
6
22
45
1.77
7583--7629
19
2.5
19
92
0
85
25
6
21
46
1.74
8491--8534
22
2.0
22
86
0
61
25
25
22
27
2.00
8486--8587
51
2.0
52
92
5
172
27
23
24
24
2.00
11073--11112
19
2.2
18
86
4
53
32
22
2
42
1.67
14969--15046
20
3.7
21
66
14
61
35
12
14
37
1.84
14956--15058
44
2.3
43
79
15
127
34
14
16
33
1.89
16206--16239
17
2.0
17
94
0
59
23
26
11
38
1.89
17667--17713
20
2.4
20
85
3
60
55
4
17
23
1.59
21462--21495
17
2.0
17
94
0
59
23
26
11
38
1.89

Tables:   1

The End!