Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016445.1 Corchorus capsularis cultivar CVL-1 contig16466, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23985

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
248--282
11
3.2
11
91
0
52
40
17
2
40
1.64
4846--4884
18
2.2
18
95
0
69
17
15
7
58
1.59
5197--5233
6
6.3
6
96
3
67
51
13
0
35
1.41
6583--6617
11
3.2
11
91
0
52
40
17
2
40
1.64
9179--9282
52
2.0
52
88
0
154
28
21
25
24
1.99
16976--17030
3
18.3
3
92
0
92
65
0
3
30
1.10
17514--17761
59
4.2
59
86
1
329
40
16
18
24
1.90

Tables:   1

The End!