Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016448.1 Corchorus capsularis cultivar CVL-1 contig16469, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37048

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6781--6814
8
4.1
8
85
7
50
23
2
14
58
1.50
7985--8188
61
3.3
61
86
2
266
37
11
22
28
1.89
10572--10606
1
35.0
1
100
0
70
100
0
0
0
0.00
11620--11674
20
2.7
19
83
10
65
45
3
7
43
1.49
19746--20164
210
2.0
207
84
6
542
30
12
23
34
1.91
22179--22491
123
2.5
123
98
0
599
33
24
12
29
1.92
23078--23251
92
1.9
91
93
1
303
26
23
16
33
1.96
23304--23360
30
1.9
30
92
7
98
19
35
17
28
1.94
23698--23806
33
3.3
33
94
0
182
44
18
10
27
1.82
23698--23839
66
2.2
66
81
2
160
42
19
9
28
1.83
23832--23936
33
3.2
33
80
2
131
45
20
9
24
1.80
26780--26812
12
2.8
12
95
0
57
24
15
18
42
1.88
30798--30926
33
3.9
33
81
4
111
20
39
27
12
1.89
30877--30928
10
4.9
10
73
13
50
23
48
23
5
1.72
30869--30931
33
1.9
33
96
0
117
22
42
25
9
1.83
32307--32336
6
5.0
6
95
0
51
16
3
16
63
1.44

Tables:   1

The End!