Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016454.1 Corchorus capsularis cultivar CVL-1 contig16475, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24124

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3252--3283
2
16.0
2
100
0
64
50
0
0
50
1.00
5731--5781
21
2.6
19
76
11
57
49
9
1
39
1.47
8094--8142
22
2.2
23
88
3
73
81
0
16
2
0.78
10824--10924
33
3.1
32
79
2
94
30
8
16
43
1.79
10874--10945
33
2.2
33
84
0
90
31
8
19
40
1.81
14165--14221
30
1.9
30
85
7
80
33
17
26
22
1.96
23317--23350
8
4.1
8
85
7
50
58
14
2
23
1.50

Tables:   1

The End!