Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016456.1 Corchorus capsularis cultivar CVL-1 contig16477, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41736

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1922--2026
33
3.2
32
81
5
129
24
9
20
45
1.80
2052--2160
33
3.3
33
97
0
200
24
11
20
44
1.84
24436--24533
33
3.0
32
82
5
99
22
38
28
10
1.87
30938--31046
33
3.3
33
88
2
157
22
40
27
10
1.86
30942--31067
66
1.9
66
82
6
157
20
39
27
11
1.88
31718--32047
175
1.9
175
97
0
624
31
13
26
28
1.93
40510--40557
20
2.3
21
85
3
62
18
10
6
64
1.45

Tables:   1

The End!