Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016457.1 Corchorus capsularis cultivar CVL-1 contig16478, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7558

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1576--1653
27
2.9
27
92
0
120
41
23
19
16
1.90
3385--3411
14
1.9
14
100
0
54
37
7
14
40
1.74
4806--4973
31
5.5
31
66
13
116
35
20
16
27
1.94
4810--4972
60
2.7
60
86
0
218
36
20
15
26
1.93
5014--5146
31
4.4
31
74
7
137
24
18
18
38
1.93
5044--5206
60
2.7
60
91
3
267
25
19
20
34
1.96
5077--5175
29
3.3
29
68
15
94
26
20
19
34
1.96

Tables:   1

The End!