Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016461.1 Corchorus capsularis cultivar CVL-1 contig16482, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40471

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1488--1567
21
3.5
24
70
25
66
57
2
2
37
1.26
2280--2319
20
1.9
22
85
10
57
40
5
0
55
1.22
2428--2492
26
2.5
26
97
2
123
40
3
10
46
1.54
3159--3252
46
2.0
46
91
0
152
15
6
35
42
1.73
5030--5068
19
2.0
20
95
5
71
0
12
5
82
0.83
11109--11830
362
2.0
354
89
3
1047
28
13
15
42
1.85
15119--15168
26
1.9
26
87
0
73
16
20
10
54
1.70
16031--16068
19
2.1
19
90
5
60
60
13
5
21
1.52
35004--35033
11
2.7
11
89
0
51
80
16
3
0
0.85

Tables:   1

The End!