Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016463.1 Corchorus capsularis cultivar CVL-1 contig16484, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34876

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3716--4150
167
2.6
166
84
1
566
40
16
14
29
1.88
5162--5251
45
2.0
45
91
0
144
26
22
17
33
1.96
4879--5437
279
2.0
279
93
2
953
33
16
16
33
1.92
9844--9876
16
2.0
17
88
5
50
42
18
0
39
1.50
10865--10910
24
2.0
24
91
4
76
43
15
17
23
1.87
23805--23834
15
2.0
15
93
0
51
40
16
13
30
1.87
31015--31113
49
2.0
49
100
0
198
36
24
10
29
1.88
33958--33983
2
13.0
2
100
0
52
50
0
0
50
1.00
34025--34068
20
2.3
19
80
11
54
63
0
2
34
1.07

Tables:   1

The End!