Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016471.1 Corchorus capsularis cultivar CVL-1 contig16492, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11510

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2698--2753
21
2.6
22
78
16
64
25
14
7
53
1.66
2717--3121
22
18.5
22
73
13
277
18
20
5
55
1.63
2719--3082
43
8.3
43
77
10
292
18
19
6
55
1.64
2834--3117
150
1.9
149
81
7
342
18
20
5
55
1.63
3275--3956
55
12.5
55
93
2
1058
24
18
7
49
1.73
3338--3427
29
3.2
29
61
20
73
24
21
8
45
1.80
3786--3859
21
3.3
21
66
23
60
20
18
10
50
1.77
3830--3917
29
3.1
29
69
21
96
21
18
10
50
1.76
4674--4728
27
2.0
27
82
6
67
45
12
1
40
1.53
4694--5026
101
3.3
100
89
4
533
38
16
3
41
1.66
4683--5026
51
6.8
50
79
5
363
38
16
3
41
1.66
5971--6002
16
2.0
16
93
0
55
0
9
18
71
1.12
9113--9189
27
2.9
27
90
0
109
37
22
22
18
1.94

Tables:   1

The End!