Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016484.1 Corchorus capsularis cultivar CVL-1 contig16505, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7816

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
585--643
30
2.0
30
93
6
102
30
18
30
20
1.96
4045--4243
100
2.0
100
90
0
317
43
7
16
32
1.76
5022--5060
2
19.5
2
100
0
78
48
51
0
0
1.00
5287--5328
2
20.5
2
85
4
57
47
2
4
45
1.36
6869--6893
3
8.3
3
100
0
50
36
0
0
64
0.94
7176--7282
53
2.0
53
94
0
187
42
5
10
41
1.62

Tables:   1

The End!