Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016486.1 Corchorus capsularis cultivar CVL-1 contig16507, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15915

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
461--512
26
2.0
26
88
0
77
34
26
13
25
1.93
1151--1209
27
2.1
28
87
6
84
55
6
28
8
1.55
2258--2283
2
13.0
2
100
0
52
50
50
0
0
1.00
4640--4664
1
25.0
1
100
0
50
0
0
0
100
0.00
11252--11302
25
2.0
25
100
0
102
41
19
11
27
1.86
12669--12715
22
2.1
22
92
0
76
53
12
4
29
1.58
14254--14310
15
3.6
17
65
18
50
33
3
8
54
1.48
15510--15535
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!