Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016487.1 Corchorus capsularis cultivar CVL-1 contig16508, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33974

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
588--619
2
16.0
2
100
0
64
50
0
0
50
1.00
4331--4356
13
2.0
13
100
0
52
38
0
30
30
1.58
10264--10297
13
2.7
13
95
4
61
61
0
0
38
0.96
10569--10640
31
2.3
31
74
9
76
59
9
4
26
1.47
11176--11454
137
2.0
137
98
0
540
33
15
18
32
1.92
12174--12271
31
3.1
32
89
4
155
33
21
9
35
1.85
12174--12313
62
2.2
62
82
6
158
36
20
8
34
1.83
13490--13573
29
2.9
29
85
0
105
29
21
11
36
1.89
13502--13588
29
3.0
29
87
0
120
33
18
14
33
1.92
15168--15257
45
2.0
45
95
0
162
35
20
20
24
1.96
17568--17614
24
2.0
24
91
0
76
44
21
8
25
1.80
21493--21553
30
2.0
32
83
6
81
45
4
18
31
1.70
21603--21637
3
11.7
3
100
0
70
34
0
0
65
0.93
24771--24822
21
2.5
21
77
0
59
32
9
25
32
1.88
31776--31811
19
1.9
20
88
11
58
30
0
0
69
0.89

Tables:   1

The End!