Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016497.1 Corchorus capsularis cultivar CVL-1 contig16518, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3949

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
116--210
46
2.1
46
100
0
190
36
7
10
45
1.67
1113--1450
138
2.4
137
86
5
457
42
9
10
36
1.72
1665--2137
141
3.4
140
93
1
779
43
10
9
36
1.71
3512--3536
13
1.9
13
100
0
50
36
8
8
48
1.62
3664--3765
32
3.3
32
67
20
99
17
15
12
53
1.72
3666--3788
60
2.0
60
95
0
219
19
15
12
52
1.73

Tables:   1

The End!