Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016499.1 Corchorus capsularis cultivar CVL-1 contig16520, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18051

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4615--4686
3
24.0
3
80
5
83
29
37
1
31
1.66
7556--8214
329
2.0
327
81
7
771
43
22
12
21
1.86
8348--8431
42
2.0
42
92
0
141
52
16
20
10
1.73
14646--14679
6
5.7
6
92
0
59
29
52
0
17
1.45
14765--14807
18
2.4
18
92
0
77
16
30
11
41
1.83
15864--15896
7
4.9
7
88
3
50
60
0
39
0
0.97
17803--17858
25
2.2
25
90
3
85
26
7
8
57
1.55
17869--17993
66
1.9
66
82
9
157
32
14
7
46
1.72

Tables:   1

The End!