Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001665.1 Corchorus capsularis cultivar CVL-1 contig01665, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3372

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
115--479
150
2.4
150
85
5
486
36
10
10
41
1.75
3122--3200
23
3.3
23
89
3
113
34
18
0
46
1.50
3209--3276
26
2.6
26
90
0
109
54
10
0
35
1.35
3215--3307
11
7.1
14
67
21
58
55
8
1
34
1.37
3209--3312
52
2.0
51
81
9
122
53
9
0
35
1.40
3329--3358
10
2.9
10
95
5
51
70
0
0
30
0.88

Tables:   1

The End!