Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001708.1 Corchorus capsularis cultivar CVL-1 contig01708, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3685

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1155--1252
22
4.5
22
75
13
85
41
13
9
35
1.76
1159--1255
44
2.2
43
85
10
126
42
13
9
35
1.76
1328--1428
22
4.5
22
74
14
89
41
10
9
37
1.74
1334--1380
24
2.0
24
83
8
60
46
10
12
29
1.76
1327--1471
68
2.1
68
85
2
193
41
10
10
37
1.73
1783--1822
14
2.7
14
88
7
53
32
7
17
42
1.77
1994--2053
29
2.1
27
81
6
66
16
23
10
50
1.75
2780--2969
66
2.9
64
75
10
179
38
17
7
36
1.78
2753--3137
153
2.5
152
86
4
517
37
16
7
37
1.78
3042--3098
21
2.7
21
80
2
60
40
14
12
33
1.83
2802--3185
153
2.5
153
84
2
423
37
16
7
37
1.78
2754--3275
22
23.9
22
68
13
154
36
17
8
37
1.80
3323--3382
21
2.7
23
76
10
70
30
23
11
35
1.90

Tables:   1

The End!