Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001733.1 Corchorus capsularis cultivar CVL-1 contig01733, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3520

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1384--1457
22
3.4
22
78
0
85
47
10
14
27
1.78
1356--1459
44
2.4
44
83
3
120
45
8
15
30
1.76
1486--1539
20
2.5
22
88
11
78
37
5
12
44
1.66
1725--1765
22
1.9
22
85
5
57
56
4
12
26
1.56
1792--1845
22
2.4
23
78
9
58
48
5
11
35
1.62
1959--2039
2
43.5
2
78
14
93
45
0
3
50
1.19
1959--2031
20
3.8
20
91
5
107
45
0
4
50
1.20

Tables:   1

The End!