Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000177.1 Corchorus capsularis cultivar CVL-1 contig00177, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3493

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--40
19
2.1
19
95
0
71
40
10
22
27
1.86
31--589
22
25.7
22
67
15
125
39
9
14
37
1.77
4--589
44
13.5
44
68
13
218
39
9
15
36
1.78
221--324
23
4.6
23
79
3
95
38
7
13
40
1.73
374--459
45
1.9
45
83
4
111
33
11
16
38
1.85

Tables:   1

The End!