Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001776.1 Corchorus capsularis cultivar CVL-1 contig01776, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3780

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
258--302
2
23.0
2
90
4
74
48
0
0
51
1.00
1096--1260
31
5.5
30
68
13
88
36
15
17
29
1.91
1101--1263
60
2.7
60
83
5
188
37
15
17
29
1.91
1292--1454
60
2.7
60
87
3
222
26
18
18
36
1.94
1291--1394
31
3.4
31
68
5
95
25
18
18
37
1.93
2722--2760
2
21.5
2
80
19
50
48
0
0
51
1.00
2722--2760
13
3.3
11
83
16
51
48
0
0
51
1.00
2729--2762
17
2.0
17
100
0
68
47
0
0
52
1.00

Tables:   1

The End!