Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001827.1 Corchorus capsularis cultivar CVL-1 contig01828, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3004

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--88
22
3.5
22
65
13
66
14
44
34
6
1.71
121--151
14
2.2
14
94
0
53
0
12
3
83
0.75
117--150
18
1.9
17
88
5
50
0
11
2
85
0.71
1314--1360
21
2.2
20
79
17
51
17
17
14
51
1.77
2086--2228
41
3.5
41
98
0
268
30
27
11
30
1.92

Tables:   1

The End!