Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001828.1 Corchorus capsularis cultivar CVL-1 contig01829, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2704

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
78--163
46
1.9
44
90
4
136
22
15
39
23
1.91
209--276
33
2.1
33
100
0
136
33
19
20
26
1.96
1262--1425
36
4.6
36
86
1
159
19
29
21
28
1.98
2471--2498
2
14.0
2
100
0
56
50
0
0
50
1.00
2665--2704
22
1.9
22
85
10
57
47
2
2
47
1.29

Tables:   1

The End!