Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001833.1 Corchorus capsularis cultivar CVL-1 contig01834, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1473

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48--144
22
4.6
22
71
19
80
37
13
5
44
1.66
47--198
62
2.5
62
90
0
241
34
14
7
44
1.73
168--683
22
23.6
21
69
12
222
35
15
9
38
1.81
1170--1290
22
5.5
22
78
7
120
32
15
9
42
1.80
1355--1441
38
2.3
37
86
3
120
56
11
17
14
1.67

Tables:   1

The End!