Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001995.1 Corchorus capsularis cultivar CVL-1 contig01998, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1001

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
147--401
39
7.1
40
77
19
278
29
9
7
53
1.62
147--401
70
3.6
69
79
11
302
29
9
7
53
1.62
197--401
40
5.6
40
81
15
248
28
9
8
53
1.62
276--372
34
3.1
31
88
10
151
29
10
7
52
1.62
147--401
104
2.4
105
92
4
415
29
9
7
53
1.62

Tables:   1

The End!