Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000207.1 Corchorus capsularis cultivar CVL-1 contig00207, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1004

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
425--482
21
2.8
21
78
5
64
25
15
8
50
1.73
558--785
7
33.6
7
66
18
99
15
25
2
56
1.53
513--767
35
7.6
35
72
18
175
16
23
3
56
1.56
628--652
12
2.1
12
100
0
50
16
32
0
52
1.44
627--700
19
3.8
19
77
7
85
14
27
1
56
1.47
601--779
40
4.2
40
69
24
125
16
23
2
57
1.52
595--809
47
4.9
45
77
14
225
15
24
2
57
1.52
674--736
27
2.3
26
76
7
63
12
25
1
60
1.42
528--809
82
3.4
81
81
8
331
15
24
3
56
1.54
710--824
47
2.4
49
82
11
148
17
20
5
56
1.60
801--927
59
2.2
59
95
0
227
19
21
7
51
1.72
920--944
7
3.6
7
100
0
50
16
28
0
56
1.41

Tables:   1

The End!