Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01002095.1 Corchorus capsularis cultivar CVL-1 contig02099, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1123

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
524--793
104
2.6
104
86
12
382
53
8
10
28
1.62
553--808
70
3.7
70
79
11
309
53
7
9
29
1.62
683--788
30
3.6
30
93
1
169
54
8
9
27
1.61
707--785
15
5.3
15
68
0
68
54
7
8
29
1.59
524--808
139
2.0
142
93
4
497
53
8
9
28
1.62
1065--1098
17
2.0
17
100
0
68
82
0
5
11
0.83

Tables:   1

The End!