Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01002152.1 Corchorus capsularis cultivar CVL-1 contig02156, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1283

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
518--580
21
3.0
21
100
0
126
61
4
23
9
1.45
746--781
11
3.3
11
92
7
56
44
2
5
47
1.41
876--920
20
2.2
20
92
7
74
37
8
6
46
1.61
983--1089
19
5.6
19
72
17
78
53
4
0
42
1.22
998--1089
8
10.9
8
73
23
73
54
3
0
42
1.16
999--1063
22
2.6
25
86
13
91
55
1
0
43
1.09
1116--1163
24
2.0
24
100
0
96
54
8
8
29
1.60

Tables:   1

The End!