Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: AWWV01002192.1 Corchorus capsularis cultivar CVL-1 contig02197, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 606

Length: 1010
ACGTcount: A:0.35, C:0.15, G:0.17, T:0.34


Found at i:844 original size:13 final size:13

Alignment explanation


    Indices: 826--850  Score: 50
    Period size: 13  Copynumber: 1.9  Consensus size: 13

        816 ATTCTTAATT

                         
        826 TTATTTATTATTC
          1 TTATTTATTATTC

                        
        839 TTATTTATTATT
          1 TTATTTATTATT

        851 GCTGCTATAG


Statistics
Matches: 12,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   12  1.00

ACGTcount: A:0.24, C:0.04, G:0.00, T:0.72


Consensus pattern (13 bp):   
TTATTTATTATTC
Done.